自然科学版
陕西师范大学学报(自然科学版)
生命科学
与肺癌侵袭转移相关的miR-424-5p靶基因的预测及鉴定
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闫位娟, 李伟, 李峰生, 吕进, 于慧杰, 王思念, 于兰, 江其生*
(火箭军总医院 中心实验室, 北京 100085)
江其生,男,教授,博士生导师。E-mail:jqs598@sina.com
摘要:
为研究miR-424-5p参与肺癌侵袭转移的分子机制,筛选与肺癌侵袭转移相关的miR-424-5p靶基因,采用文献调研分析miR-424-5p与肺癌侵袭转移相关的靶基因,并用生物信息学方法筛选miR-424-5p与靶基因3′UTR结合分数较高的靶基因;结合二者的交集筛选出部分靶基因,构建含靶分子3′UTR的荧光素酶报告基因质粒;分别将miR-424-5p模拟物(mimic)与含有靶分子3′UTR的荧光素酶报告基因质粒共转染293T细胞,进行荧光素酶报告基因实验鉴定靶基因。生物信息学分析表明,与肺癌侵袭转移信号通路相关的基因之一是细胞因子信号传导抑制子5(Suppressor of cytokine signaling 5, SOCS5)。在miR-424-5p mimic 或阴性对照(negative control, NC)与野生型靶分子SOCS5 3′UTR双荧光素酶报告基因载体共转入293T细胞后,荧光素酶活性值降低至NC 组的46%(P<0.01)。而miR-424-5p mimic与靶分子3′UTR突变型报告基因载体共转后,荧光素酶的活性与对照组相比几乎无改变。表明SOCS5可能是miR-424-5p的肺癌侵袭转移相关的一个靶分子。
关键词:
miR-424-5p; 靶基因; 生物信息学; 肿瘤侵袭转移
收稿日期:
2017-01-15
中图分类号:
R734.2
文献标识码:
A
文章编号:
1672-4291(2017)03-0068-05doi:10.15983/j.cnki.jsnu.2017.03.334
基金项目:
国家自然科学基金(81172130)
Doi:
Prediction and identification for targetgenes of miR-424-5p associated with invasion and migrationof lung cancer
YAN Weijuan, LI Wei, LI Fengsheng, L Jin, YU Huijie,WANG Sinian, YU Lan, JIANG Qisheng*
(Central Laboratory of Rocket Army General Hospital, Chinese People′s Liberation Army, Beijing 100085, China)
Abstract:
In order to further study the molecular mechanism of miR-424-5p involved in invasion and migration of lung cancer,screen for target genes of miR-424-5p associated with invasion and migration of lung cancer,the target genes of miR-424-5p associated with invasion and migration of lung cancer were investigated by literature review and analyzed using bioinformatics methods.The candidate target genes were screened out combined these two methods.The modified luciferase reporter vector pmirGLO reporters containing wild type and mutant 3′UTR sequences of the SOCS5 were constructed.These reporters and miR-424-5p mimics/NC were co-transfected into 293T cells respectively, and the relative luciferase activities were detected by dual luciferase reporter gene system.SIAH1 and SOCS5 were screened out as the candidate target genes of miR-424-5p by literatures review and bioinformatics analysis. Dual luciferase reporter gene system revealed that the relative luciferase activity of the reporter vector containing 3′UTR sequences of the SOCS5 and miR-424-5p mimic group was reduced to 46% of NC group.The relative luciferase activity of reporter vector containing of mutant 3′UTR sequences of the SOCS5 and miR-424-5p mimic group was not changed compared with that of reporter NC group. The results showed that SOCS5 was a potential target gene associated invasion and migrationof lung cancer of miR-424-5p.
KeyWords:
miR-424-5p; target gene; bioinformatics analysis; invasion and migration of cancer